Pairwise fitting emdb-5168 on pdb-2w4v by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-2w4v by gmfit(PID:4045832).





RANK[1] Corr.Coeff:0.427

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-2w4v)

display:



color:


b'ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE QUICK     ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.427
0.388
0.378
0.367
0.367
0.364
0.362
0.356
0.208
0.193







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2w4v"(PDB-format) or 
 "2w4v"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.373437,0.573745,0.728945 162.905649 center 0,0,0 model #1
move -74.724487,12.748986,-38.668487 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!