Pairwise fitting emdb-5168 on pdb-1zo1 by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-1zo1 by gmfit(PID:4135859).





RANK[1] Corr.Coeff:0.468

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-1zo1)

display:



color:


b'IF2, IF1, AND TRNA FITTED TO CRYO-EM DATA OF E. COLI 70S INITIATION   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.468
0.398
0.394
0.390
0.381
0.356
0.349
0.324
0.179
0.157







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1zo1"(PDB-format) or 
 "1zo1"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.996000,-0.072708,0.051931 45.536600 center 0,0,0 model #1
move -28.534604,15.837607,-28.573216 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!