Pairwise fitting emdb-5168 on emdb-6724 by gmfit










Pairwise fitting of target emdb-5168 on reference emdb-6724 by gmfit(PID:4057919).





RANK[1] Corr.Coeff:0.562

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(emdb-6724)

display:



color:


Cryo-EM structure of human ABCA1 [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.562
0.557
0.547
0.541
0.509
0.482
0.458
0.443
0.318
0.282







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6724.map.gz", and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.775114,0.631112,0.029947 175.401159 center 0,0,0 model #1
move 125.022849,132.832917,124.075463 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 6724)]

[Download the target GMM(emdb 5168)]

[Download gmfit result file(4057919)]