Pairwise fitting emdb-5034 on emdb-8446 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-8446 by gmfit(PID:664981).





RANK[1] Corr.Coeff:0.496

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-8446)

display:



color:


Structure of bL17-depleted large ribosomal subunit assembly intermediate - Class D1 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.496
0.485
0.458
0.452
0.424
0.382
0.379
0.376
0.295
0.294







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8446.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.301005,0.170007,0.938346 66.595966 center 0,0,0 model #1
move 231.334688,10.631800,-39.150230 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!