Pairwise fitting emdb-5034 on emdb-6708 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-6708 by gmfit(PID:524861).





RANK[1] Corr.Coeff:0.467

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-6708)

display:



color:


Intact ATR/Mec1-ATRIP/Ddc2 complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.467
0.443
0.439
0.438
0.437
0.434
0.422
0.419
0.271
0.270







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6708.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.586124,-0.797270,0.144288 135.528009 center 0,0,0 model #1
move 427.125438,343.564153,128.404832 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!