Pairwise fitting emdb-5034 on emdb-3720 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-3720 by gmfit(PID:4090363).





RANK[1] Corr.Coeff:0.402

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-3720)

display:



color:


The structure of the COPI coat leaf [Ngauss:20]



[Download the reference map]





Other Transformations
rank
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Corr.Coeff.
0.402
0.387
0.381
0.370
0.357
0.357
0.300
0.272
0.239
0.239







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3720.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.341129,0.939695,-0.024601 173.878501 center 0,0,0 model #1
move 123.091836,-115.983601,321.389029 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3720)]

[Download the target GMM(emdb 5034)]

[Download gmfit result file(4090363)]