Pairwise fitting emdb-5034 on emdb-3669 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-3669 by gmfit(PID:4128627).





RANK[1] Corr.Coeff:0.432

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-3669)

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color:


Closed dimer (C1) of human ATM (Ataxia telangiectasia mutated) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.432
0.424
0.416
0.413
0.400
0.398
0.389
0.380
0.259
0.253







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3669.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.921043,-0.185254,-0.342579 90.705272 center 0,0,0 model #1
move -49.655940,67.748576,251.745013 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3669)]

[Download the target GMM(emdb 5034)]

[Download gmfit result file(4128627)]