Pairwise fitting emdb-5034 on emdb-3623 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-3623 by gmfit(PID:3798332).





RANK[1] Corr.Coeff:0.542

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-3623)

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color:


Microtubule-bound MKLP2 motor domain in the presence of AMPPNP [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.542
0.522
0.519
0.510
0.413
0.411
0.396
0.378
0.229
0.228







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3623.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.869701,0.105395,-0.482196 106.799084 center 0,0,0 model #1
move -73.289287,227.836376,389.408287 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!