Pairwise fitting emdb-5034 on emdb-3622 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-3622 by gmfit(PID:4120140).





RANK[1] Corr.Coeff:0.547

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-3622)

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Microtubule-bound MKLP2 motor domain in the presence of ADP.AlFx [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.547
0.529
0.523
0.517
0.444
0.435
0.428
0.420
0.419
0.406







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3622.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.870333,0.114634,-0.478936 105.642697 center 0,0,0 model #1
move -70.916919,225.758500,391.172848 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3622)]

[Download the target GMM(emdb 5034)]

[Download gmfit result file(4120140)]