Pairwise fitting emdb-5034 on emdb-3622 by gmfit



Pairwise fitting of target emdb-5034 on reference emdb-3622 by gmfit(PID:4112507).

RANK[1] Corr.Coeff:0.547 [JSmol] [Molmil]
TARGET(emdb-5034)
display:
color:
Structure of a type IV secretion system core complex [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5034)]
REFERENCE(emdb-3622)
display:
color:
Microtubule-bound MKLP2 motor domain in the presence of ADP.AlFx [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.547 0.529 0.523 0.517 0.444 0.435 0.428 0.420 0.419 0.406

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_3622.map.gz", and read it.
  2. Download the Target map "emd_5034.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.870333,0.114634,-0.478936 105.642697 center 0,0,0 model #1
    move -70.916919,225.758500,391.172848 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 3622)] [Download the target GMM(emdb 5034)] [Download gmfit result file(4112507)]