Pairwise fitting emdb-5034 on emdb-1871 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1871 by gmfit(PID:3524279).





RANK[1] Corr.Coeff:0.452

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1871)

display:



color:


Three-dimensional model of Salmonella's needle complex at subnanometer resolution [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.452
0.447
0.440
0.436
0.431
0.414
0.386
0.361
0.165
0.160







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1871.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.993706,0.108315,-0.028579 178.602371 center 0,0,0 model #1
move -200.612346,136.694884,179.145835 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!