Pairwise fitting emdb-5034 on emdb-1807 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1807 by gmfit(PID:3725902).





RANK[1] Corr.Coeff:0.452

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1807)

display:



color:


Saccharomyces cerevisiae ribonucleotide reductase hole complex at the presence of dATP [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.452
0.411
0.405
0.404
0.403
0.403
0.396
0.393
0.299
0.299







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1807.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.557110,-0.219712,-0.800847 47.271784 center 0,0,0 model #1
move 12.033263,242.606294,-57.514957 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!