Pairwise fitting emdb-5034 on emdb-1231 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1231 by gmfit(PID:275769).





RANK[1] Corr.Coeff:0.607

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1231)

display:



color:


Structure of the connector of bacteriophage T7 at 8A resolution: structural homologies of a basic component of a DNA translocating machinery. [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.607
0.581
0.543
0.541
0.511
0.508
0.495
0.465
0.282
0.281







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1231.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.135353,0.185313,0.973313 23.545805 center 0,0,0 model #1
move 42.592394,-74.159923,-32.206126 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!