Pairwise fitting emdb-1975 on pdb-5fja by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-5fja by gmfit(PID:4013133).





RANK[1] Corr.Coeff:0.584

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

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Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-5fja)

display:



color:


b'CRYO-EM STRUCTURE OF YEAST RNA POLYMERASE III AT 4.7 A                ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.584
0.536
0.530
0.491
0.484
0.470
0.466
0.451
0.405
0.390







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5fja"(PDB-format) or 
 "5fja"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.774902,-0.224829,-0.590745 146.041050 center 0,0,0 model #1
move -186.824475,171.951204,55.632956 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!