Pairwise fitting emdb-1975 on pdb-5an9 by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-5an9 by gmfit(PID:3660191).





RANK[1] Corr.Coeff:0.584

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

display:



color:



Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-5an9)

display:



color:


b'MECHANISM OF EIF6 RELEASE FROM THE NASCENT 60S RIBOSOMAL SUBUNIT      ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.584
0.540
0.514
0.507
0.464
0.416
0.414
0.411
0.409
0.389







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5an9"(PDB-format) or 
 "5an9"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.171073,0.974311,0.146463 79.686880 center 0,0,0 model #1
move -16.120646,-68.690125,336.300579 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!