Pairwise fitting emdb-1975 on pdb-3j16 by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-3j16 by gmfit(PID:3773814).





RANK[1] Corr.Coeff:0.588

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

display:



color:



Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-3j16)

display:



color:


b'MODELS OF RIBOSOME-BOUND DOM34P AND RLI1P AND THEIR RIBOSOMAL BINDING ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.588
0.511
0.486
0.479
0.468
0.462
0.454
0.410
0.400
0.392







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j16"(PDB-format) or 
 "3j16"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.431871,-0.427252,-0.794320 172.993350 center 0,0,0 model #1
move 330.223816,136.216398,-136.070440 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!