Pairwise fitting emdb-1975 on emdb-1840 by gmfit



Pairwise fitting of target emdb-1975 on reference emdb-1840 by gmfit(PID:1263688).

RANK[1] Corr.Coeff:0.526 [JSmol] [Molmil]
TARGET(emdb-1975)
display:
color:
Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1975)]
REFERENCE(emdb-1840)
display:
color:
The RNA polymerase and transcription elongation factor Spt4-5 complex structure [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.526 0.432 0.395 0.392 0.373 0.342 0.335 0.324 0.310 0.304

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1840.map.gz", and read it.
  2. Download the Target map "emd_1975.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.258370,0.737123,-0.624416 162.045943 center 0,0,0 model #1
    move 89.980047,268.861834,240.872363 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!