Pairwise fitting emdb-1936 on emdb-5473 by gmfit










Pairwise fitting of target emdb-1936 on reference emdb-5473 by gmfit(PID:4015432).





RANK[1] Corr.Coeff:0.858

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1936)

display:



color:



N42 Rabbit Hemorrhagic Disease Virus (RHDV) T3 capsid [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1936)]







REFERENCE(emdb-5473)

display:



color:


Dynamics in Cryo EM Reconstructions Visualized with Maximum-Likelihood Derived Variance Maps [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.858
0.849
0.847
0.846
0.843
0.843
0.842
0.840
0.839
0.839







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5473.map.gz", and read it.

  2.  Download the Target map "emd_1936.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.943587,0.271586,0.189430 26.264148 center 0,0,0 model #1
move -3.453492,0.488823,2.384717 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!