Pairwise fitting emdb-1936 on emdb-5472 by gmfit



Pairwise fitting of target emdb-1936 on reference emdb-5472 by gmfit(PID:1587800).

RANK[1] Corr.Coeff:0.831 [JSmol] [Molmil]
TARGET(emdb-1936)
display:
color:
N42 Rabbit Hemorrhagic Disease Virus (RHDV) T3 capsid [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1936)]
REFERENCE(emdb-5472)
display:
color:
Dynamics in Cryo EM Reconstructions Visualized with Maximum-Likelihood Derived Variance Maps [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.831 0.826 0.823 0.819 0.818 0.816 0.815 0.814 0.814 0.812

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5472.map.gz", and read it.
  2. Download the Target map "emd_1936.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.367166,-0.890036,0.270231 85.838444 center 0,0,0 model #1
    move -2.615914,-0.530224,-5.990808 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!