Pairwise fitting emdb-1936 on emdb-5428 by gmfit










Pairwise fitting of target emdb-1936 on reference emdb-5428 by gmfit(PID:3901106).





RANK[1] Corr.Coeff:0.825

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1936)

display:



color:



N42 Rabbit Hemorrhagic Disease Virus (RHDV) T3 capsid [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1936)]







REFERENCE(emdb-5428)

display:



color:


Cryo-EM reconstruction of Nudaurelia capensis omega virus (NwV) capsid at 4hr time point following maturation initiation [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.825
0.824
0.822
0.814
0.813
0.812
0.812
0.812
0.811
0.811







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5428.map.gz", and read it.

  2.  Download the Target map "emd_1936.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.562621,-0.567874,0.600813 95.901208 center 0,0,0 model #1
move -1.340137,1.266811,-0.748065 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!