Pairwise fitting emdb-1908 on pdb-5x0x by gmfit










Pairwise fitting of target emdb-1908 on reference pdb-5x0x by gmfit(PID:2378065).





RANK[1] Corr.Coeff:0.620

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

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Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(pdb-5x0x)

display:



color:


b'COMPLEX OF SNF2-NUCLEOSOME COMPLEX WITH SNF2 BOUND TO POSITION +6 OF  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.620
0.579
0.575
0.565
0.557
0.544
0.494
0.462
0.454
0.438







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5x0x"(PDB-format) or 
 "5x0x"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.144925,-0.775230,0.614829 128.151175 center 0,0,0 model #1
move 367.341574,198.730790,153.117815 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!