Pairwise fitting emdb-1836 on pdb-5urf by gmfit










Pairwise fitting of target emdb-1836 on reference pdb-5urf by gmfit(PID:424402).





RANK[1] Corr.Coeff:0.964

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1836)

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color:



Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1836)]







REFERENCE(pdb-5urf)

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color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.964
0.916
0.895
0.894
0.893
0.888
0.888
0.886
0.885
0.882







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5urf"(PDB-format) or 
 "5urf"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1836.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.004047,-0.851770,0.523901 144.476868 center 0,0,0 model #1
move 275.171333,-1.262576,108.856843 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!