Pairwise fitting emdb-1836 on emdb-8574 by gmfit










Pairwise fitting of target emdb-1836 on reference emdb-8574 by gmfit(PID:47957).





RANK[1] Corr.Coeff:0.937

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1836)

display:



color:



Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1836)]







REFERENCE(emdb-8574)

display:



color:


Single particle reconstruction of chimeric adeno-associated virus-DJ with a Heparanoid Pentasaccharide [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.937
0.919
0.896
0.894
0.893
0.884
0.881
0.879
0.876
0.873







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8574.map.gz", and read it.

  2.  Download the Target map "emd_1836.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.014985,-0.342859,0.939267 119.998776 center 0,0,0 model #1
move 271.933110,2.516078,-114.656529 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!