Pairwise fitting emdb-1836 on emdb-1882 by gmfit










Pairwise fitting of target emdb-1836 on reference emdb-1882 by gmfit(PID:1291071).





RANK[1] Corr.Coeff:0.740

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1836)

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Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1836)]







REFERENCE(emdb-1882)

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Mutually-induced conformational switching of RNA and coat protein underpins efficient assembly of a viral capsid. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.740
0.730
0.730
0.728
0.728
0.728
0.725
0.725
0.725
0.725







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1882.map.gz", and read it.

  2.  Download the Target map "emd_1836.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.606736,-0.455932,-0.651151 142.921621 center 0,0,0 model #1
move -16.160462,87.992417,-3.091682 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!