Pairwise fitting emdb-1833 on pdb-5udb by gmfit










Pairwise fitting of target emdb-1833 on reference pdb-5udb by gmfit(PID:3910255).





RANK[1] Corr.Coeff:0.539

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1833)

display:



color:



Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(pdb-5udb)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.539
0.509
0.506
0.499
0.478
0.475
0.462
0.424
0.409
0.396







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5udb"(PDB-format) or 
 "5udb"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.302613,-0.161461,-0.939338 158.726005 center 0,0,0 model #1
move 129.419927,121.871486,139.224717 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!