Pairwise fitting emdb-1833 on pdb-3zq1 by gmfit










Pairwise fitting of target emdb-1833 on reference pdb-3zq1 by gmfit(PID:4088497).





RANK[1] Corr.Coeff:0.532

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1833)

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Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(pdb-3zq1)

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color:


b'VISUALIZING GROEL-ES IN THE ACT OF ENCAPSULATING A NON-NATIVE         ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.532
0.512
0.489
0.484
0.458
0.452
0.451
0.451
0.429
0.424







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3zq1"(PDB-format) or 
 "3zq1"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.810154,-0.196157,0.552425 105.972980 center 0,0,0 model #1
move -5.720782,3.368809,-11.795118 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 3zq1)]

[Download the target GMM(emdb 1833)]

[Download gmfit result file(4088497)]