Pairwise fitting emdb-1833 on pdb-3j99 by gmfit










Pairwise fitting of target emdb-1833 on reference pdb-3j99 by gmfit(PID:4118460).





RANK[1] Corr.Coeff:0.489

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1833)

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color:



Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(pdb-3j99)

display:



color:


b'STRUCTURE OF 20S SUPERCOMPLEX DETERMINED BY SINGLE PARTICLE           ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.489
0.451
0.425
0.417
0.410
0.380
0.370
0.353
0.347
0.329







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j99"(PDB-format) or 
 "3j99"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.175202,0.476896,-0.861321 109.616448 center 0,0,0 model #1
move 14.313900,-7.087266,0.972223 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!