Pairwise fitting emdb-1833 on emdb-8101 by gmfit










Pairwise fitting of target emdb-1833 on reference emdb-8101 by gmfit(PID:529758).





RANK[1] Corr.Coeff:0.477

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1833)

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Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(emdb-8101)

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Cryo-EM structure of GluN1/GluN2B NMDA receptor in the DCKA/D-APV-bound conformation, state 2 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.477
0.437
0.414
0.382
0.367
0.323
0.320
0.291
0.262
0.262







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8101.map.gz", and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.944078,-0.211956,0.252568 118.051500 center 0,0,0 model #1
move 113.900271,99.432888,121.225138 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!