Pairwise fitting emdb-1774 on pdb-3j81 by gmfit










Pairwise fitting of target emdb-1774 on reference pdb-3j81 by gmfit(PID:3977745).





RANK[1] Corr.Coeff:0.732

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1774)

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Understanding Ribosome Assembly: The Structure of in vivo Assembled Immature 30S Subunits Revealed by Cryo-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1774)]







REFERENCE(pdb-3j81)

display:



color:


b'CRYOEM STRUCTURE OF A PARTIAL YEAST 48S PREINITIATION COMPLEX         ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.732
0.603
0.544
0.527
0.442
0.427
0.414
0.409
0.405
0.366







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j81"(PDB-format) or 
 "3j81"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1774.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.373327,0.437213,-0.818213 156.234643 center 0,0,0 model #1
move 177.260167,479.947400,209.098987 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!