Pairwise fitting emdb-1774 on emdb-1349 by gmfit



Pairwise fitting of target emdb-1774 on reference emdb-1349 by gmfit(PID:1146797).

RANK[1] Corr.Coeff:0.706 [JSmol] [Molmil]
TARGET(emdb-1774)
display:
color:
Understanding Ribosome Assembly: The Structure of in vivo Assembled Immature 30S Subunits Revealed by Cryo-Electron Microscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1774)]
REFERENCE(emdb-1349)
display:
color:
The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.706 0.556 0.542 0.504 0.497 0.479 0.405 0.382 0.343 0.314

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1349.map.gz", and read it.
  2. Download the Target map "emd_1774.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.111731,-0.822656,0.557453 103.942263 center 0,0,0 model #1
    move 249.795474,-127.888655,-33.365386 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!