Pairwise fitting emdb-1774 on emdb-1346 by gmfit










Pairwise fitting of target emdb-1774 on reference emdb-1346 by gmfit(PID:270440).





RANK[1] Corr.Coeff:0.714

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1774)

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Understanding Ribosome Assembly: The Structure of in vivo Assembled Immature 30S Subunits Revealed by Cryo-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1774)]







REFERENCE(emdb-1346)

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The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.714
0.543
0.540
0.523
0.495
0.476
0.458
0.446
0.391
0.352







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1346.map.gz", and read it.

  2.  Download the Target map "emd_1774.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.116370,-0.824976,0.553058 105.870678 center 0,0,0 model #1
move 249.077382,-125.521302,-20.961746 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!