Pairwise fitting emdb-1770 on pdb-6eml by gmfit










Pairwise fitting of target emdb-1770 on reference pdb-6eml by gmfit(PID:3920158).





RANK[1] Corr.Coeff:0.793

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(pdb-6eml)

display:



color:


b'CRYO-EM STRUCTURE OF A LATE PRE-40S RIBOSOMAL SUBUNIT FROM            ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.793
0.718
0.659
0.656
0.632
0.624
0.618
0.598
0.594
0.531







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "6eml"(PDB-format) or 
 "6eml"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.102709,0.912857,0.395149 17.088503 center 0,0,0 model #1
move 201.208712,204.143868,208.105497 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!