Pairwise fitting emdb-1770 on emdb-8479 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-8479 by gmfit(PID:2554274).





RANK[1] Corr.Coeff:0.526

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-8479)

display:



color:


Cryo-EM map of the transcriptional Mediator [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.526
0.492
0.480
0.453
0.444
0.424
0.401
0.397
0.379
0.367







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8479.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.813179,-0.565503,0.137642 164.005365 center 0,0,0 model #1
move 226.592515,228.854574,226.723518 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!