Pairwise fitting emdb-1770 on emdb-6780 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-6780 by gmfit(PID:3931908).





RANK[1] Corr.Coeff:0.839

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-6780)

display:



color:


Small subunit of Toxoplasma gondii ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.839
0.752
0.700
0.680
0.654
0.640
0.637
0.633
0.631
0.573







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6780.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.722174,-0.689224,-0.058606 177.187551 center 0,0,0 model #1
move 166.526486,248.131453,225.642603 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!