Pairwise fitting emdb-1770 on emdb-4080 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-4080 by gmfit(PID:4088663).





RANK[1] Corr.Coeff:0.857

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

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30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-4080)

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Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.857
0.728
0.664
0.645
0.641
0.636
0.621
0.621
0.532
0.518







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_4080.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.059907,-0.333707,0.940771 162.999166 center 0,0,0 model #1
move 168.381918,168.482177,171.447703 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 4080)]

[Download the target GMM(emdb 1770)]

[Download gmfit result file(4088663)]