Pairwise fitting emdb-1770 on emdb-4076 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-4076 by gmfit(PID:3562981).





RANK[1] Corr.Coeff:0.857

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-4076)

display:



color:


Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form (state-2A) [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.857
0.728
0.688
0.645
0.641
0.631
0.607
0.584
0.509
0.499







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_4076.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.068593,-0.321635,0.944376 164.987646 center 0,0,0 model #1
move 169.339483,170.662781,169.956376 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!