Pairwise fitting emdb-1770 on emdb-3663 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-3663 by gmfit(PID:526523).





RANK[1] Corr.Coeff:0.852

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-3663)

display:



color:


RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.852
0.704
0.609
0.591
0.581
0.579
0.575
0.564
0.536
0.492







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3663.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.679673,0.496311,0.540111 175.514384 center 0,0,0 model #1
move 174.578983,178.132913,179.604126 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!