Pairwise fitting emdb-1770 on emdb-3661 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-3661 by gmfit(PID:4068273).





RANK[1] Corr.Coeff:0.829

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-3661)

display:



color:


RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.829
0.697
0.605
0.583
0.581
0.575
0.575
0.575
0.538
0.498







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3661.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.677260,0.499345,0.540346 177.191641 center 0,0,0 model #1
move 173.084289,176.778640,179.964155 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!