Pairwise fitting emdb-1770 on emdb-3532 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-3532 by gmfit(PID:4092170).





RANK[1] Corr.Coeff:0.866

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-3532)

display:



color:


Cryo-EM reconstruction of the small subunit of the chloroplast ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.866
0.715
0.661
0.619
0.609
0.596
0.580
0.569
0.482
0.482







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3532.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.064969,0.868040,-0.492225 104.648179 center 0,0,0 model #1
move 186.137933,169.696471,221.310286 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3532)]

[Download the target GMM(emdb 1770)]

[Download gmfit result file(4092170)]