Pairwise fitting emdb-1737 on emdb-3383 by gmfit










Pairwise fitting of target emdb-1737 on reference emdb-3383 by gmfit(PID:4125176).





RANK[1] Corr.Coeff:0.543

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

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color:



Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(emdb-3383)

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color:


Transcription initiation complex structures elucidate DNA opening (CC) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.543
0.521
0.509
0.473
0.473
0.456
0.456
0.451
0.449
0.447







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3383.map.gz", and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.886643,0.075545,-0.456242 161.633881 center 0,0,0 model #1
move 188.803749,408.482284,391.976104 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3383)]

[Download the target GMM(emdb 1737)]

[Download gmfit result file(4125176)]