Pairwise fitting emdb-1718 on pdb-5ngm by gmfit










Pairwise fitting of target emdb-1718 on reference pdb-5ngm by gmfit(PID:21236).





RANK[1] Corr.Coeff:0.869

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1718)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1718)]







REFERENCE(pdb-5ngm)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.869
0.733
0.702
0.694
0.684
0.683
0.656
0.651
0.641
0.640







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5ngm"(PDB-format) or 
 "5ngm"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1718.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.767289,0.197558,-0.610113 137.521602 center 0,0,0 model #1
move 175.747391,492.201898,334.352210 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 5ngm)]

[Download the target GMM(emdb 1718)]

[Download gmfit result file(21236)]