Pairwise fitting emdb-1718 on pdb-4v71 by gmfit










Pairwise fitting of target emdb-1718 on reference pdb-4v71 by gmfit(PID:1261443).





RANK[1] Corr.Coeff:0.865

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1718)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1718)]







REFERENCE(pdb-4v71)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.865
0.726
0.721
0.717
0.713
0.706
0.699
0.676
0.672
0.661







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v71"(PDB-format) or 
 "4v71"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1718.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.011678,-0.032191,-0.999413 3.004414 center 0,0,0 model #1
move -8.728706,12.182946,-2.383353 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!