Pairwise fitting emdb-1718 on emdb-1799 by gmfit










Pairwise fitting of target emdb-1718 on reference emdb-1799 by gmfit(PID:647).





RANK[1] Corr.Coeff:0.867

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1718)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1718)]







REFERENCE(emdb-1799)

display:



color:


tRNA translocation on the 70S ribosome: the post-translocational translocation intermediate TI(POST) [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.867
0.712
0.695
0.679
0.671
0.665
0.662
0.632
0.630
0.619







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1799.map.gz", and read it.

  2.  Download the Target map "emd_1718.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.227047,-0.862278,0.452687 106.884120 center 0,0,0 model #1
move 480.633661,174.838119,71.655959 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1799)]

[Download the target GMM(emdb 1718)]

[Download gmfit result file(647)]