Pairwise fitting emdb-1717 on pdb-4v6s by gmfit



Pairwise fitting of target emdb-1717 on reference pdb-4v6s by gmfit(PID:1658688).

RANK[1] Corr.Coeff:0.859 [JSmol] [Molmil]
TARGET(emdb-1717)
display:
color:
Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1717)]
REFERENCE(pdb-4v6s)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.859 0.672 0.665 0.664 0.657 0.655 0.653 0.652 0.636 0.631

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4v6s"(PDB-format) or "4v6s"(mmCIF-format), and read it.
  2. Download the Target map "emd_1717.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.787208,0.188318,-0.587231 137.603327 center 0,0,0 model #1
    move -55.119558,281.191893,132.615863 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!