Pairwise fitting emdb-1717 on pdb-3jcd by gmfit



Pairwise fitting of target emdb-1717 on reference pdb-3jcd by gmfit(PID:1631629).

RANK[1] Corr.Coeff:0.865 [JSmol] [Molmil]
TARGET(emdb-1717)
display:
color:
Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1717)]
REFERENCE(pdb-3jcd)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.865 0.699 0.691 0.690 0.681 0.680 0.679 0.650 0.645 0.635

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3jcd"(PDB-format) or "3jcd"(mmCIF-format), and read it.
  2. Download the Target map "emd_1717.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.854193,0.097392,-0.510754 74.930353 center 0,0,0 model #1
    move 3.675763,398.986565,59.972299 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!