Pairwise fitting emdb-1711 on pdb-5fuu by gmfit










Pairwise fitting of target emdb-1711 on reference pdb-5fuu by gmfit(PID:3187108).





RANK[1] Corr.Coeff:0.685

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(pdb-5fuu)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.685
0.664
0.661
0.632
0.628
0.615
0.614
0.613
0.601
0.599







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5fuu"(PDB-format) or 
 "5fuu"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.626912,0.263916,-0.733027 87.574948 center 0,0,0 model #1
move 162.199099,172.984247,170.125519 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!