Pairwise fitting emdb-1711 on pdb-2y7c by gmfit










Pairwise fitting of target emdb-1711 on reference pdb-2y7c by gmfit(PID:4115315).





RANK[1] Corr.Coeff:0.604

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(pdb-2y7c)

display:



color:


b'ATOMIC MODEL OF THE OCR-BOUND METHYLASE COMPLEX FROM THE TYPE I       ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.604
0.565
0.553
0.553
0.547
0.546
0.536
0.536
0.526
0.520







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2y7c"(PDB-format) or 
 "2y7c"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.869284,0.364272,0.334141 169.815993 center 0,0,0 model #1
move 5.320122,0.436098,-0.756626 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!