Pairwise fitting emdb-1711 on pdb-1suv by gmfit










Pairwise fitting of target emdb-1711 on reference pdb-1suv by gmfit(PID:3170416).





RANK[1] Corr.Coeff:0.655

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(pdb-1suv)

display:



color:


b'STRUCTURE OF HUMAN TRANSFERRIN RECEPTOR-TRANSFERRIN COMPLEX           ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.655
0.632
0.621
0.620
0.613
0.611
0.602
0.594
0.586
0.586







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1suv"(PDB-format) or 
 "1suv"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.478958,-0.845903,-0.234622 139.727484 center 0,0,0 model #1
move -0.854551,4.237077,-8.225324 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!