Pairwise fitting emdb-1711 on emdb-6055 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-6055 by gmfit(PID:2445400).





RANK[1] Corr.Coeff:0.615

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-6055)

display:



color:


Negative stain EM structure of the yeast dynein motor domain in the presence of ATP [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.615
0.568
0.541
0.533
0.525
0.524
0.515
0.509
0.495
0.478







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6055.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.926531,-0.354426,0.126184 84.763068 center 0,0,0 model #1
move 133.453960,139.414135,125.625025 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!