Pairwise fitting emdb-1711 on emdb-2784 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-2784 by gmfit(PID:579643).





RANK[1] Corr.Coeff:0.661

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

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color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-2784)

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color:


Architecture of the RNA polymerase II-Mediator core transcription initiation complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.661
0.659
0.649
0.649
0.620
0.612
0.604
0.600
0.598
0.597







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2784.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.997137,0.055155,-0.051730 54.340503 center 0,0,0 model #1
move 191.036061,196.420193,181.005180 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!