Pairwise fitting emdb-1711 on emdb-1242 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-1242 by gmfit(PID:1324052).





RANK[1] Corr.Coeff:0.691

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

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color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-1242)

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color:


Visualizing the ATPase cycle in a protein disaggregating machine: structural basis for substrate binding by ClpB. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.691
0.673
0.633
0.630
0.628
0.622
0.618
0.617
0.616
0.590







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1242.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.235956,-0.065489,-0.969554 159.722979 center 0,0,0 model #1
move -1.140688,-1.323663,5.872508 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!